For analysing INDRA gene (pulser) data.
Created by KVClassFactory on Mon Jun 4 19:24:11 2007 Author: e_ivamos
Definition at line 21 of file KVINDRAGeneDataAnalyser.h.
Public Member Functions | |
| KVINDRAGeneDataAnalyser () | |
| Default constructor. More... | |
| virtual | ~KVINDRAGeneDataAnalyser () |
| Destructor. More... | |
| virtual void | SubmitTask () |
 Public Member Functions inherited from KVDataSetAnalyser | |
| KVDataSetAnalyser () | |
| Default constructor. More... | |
| virtual | ~KVDataSetAnalyser () |
| Destructor. More... | |
| virtual void | AddJobDescriptionList (TList *) |
| virtual void | ChooseAnalysisTask () |
| void | ChooseDataSet () |
| void | ChooseDataType () |
| void | ChooseRuns (KVDBSystem *system=nullptr, const Char_t *data_type="") |
| void | ChooseSystem (const Char_t *data_type="") |
| void | ClearRunList () |
| TString | ExpandAutoBatchName (const Char_t *format) const |
| KVDBRun * | GetAnalysedRun () const |
| KVDBSystem * | GetAnalysedSystem () const |
| const KVDataSet * | GetDataSet () const |
| const KVNumberList & | GetFullRunList () const |
| const KV2Body * | GetKinematics () const |
| Return pointer to kinematics of analysed system if defined. More... | |
| Int_t | GetNumberOfFilesToAnalyse () const |
| const Char_t * | GetRecognisedAutoBatchNameKeywords () const |
| KVString | GetRootDirectoryOfDataToAnalyse () const |
| Returns path to data to be analysed. More... | |
| const KVNumberList & | GetRunList () const |
| Int_t | GetRunNumberFromFileName (const Char_t *) |
| Get the run number from the filename. More... | |
| const KVDBSystem * | GetSystem () const |
| Bool_t | IsChooseDataSet () const |
| Bool_t | IsChooseRuns () const |
| Bool_t | IsChooseSystem () const |
| Bool_t | IsChooseTask () const |
| Bool_t | ReadBatchEnvFile (const Char_t *filename) |
| void | Reset () |
| void | SetChooseDataSet (Bool_t yes=kTRUE) |
| void | SetChooseRuns (Bool_t yes=kTRUE) |
| void | SetChooseSystem (Bool_t yes=kTRUE) |
| void | SetChooseTask (Bool_t yes=kTRUE) |
| void | SetDataSet (const Char_t *name) |
| void | SetDataSet (KVDataSet *ds) |
| void | SetFullRunList (const KVNumberList &nl) |
| void | SetRuns (const KVNumberList &nl, Bool_t check=kTRUE) |
| void | SetSystem (KVDBSystem *syst) |
| Set the System used in the analysis. More... | |
| TString | SystemBatchName () const |
| void | WriteBatchEnvFile (const Char_t *jobname, Bool_t save=kTRUE) |
| Public Member Functions inherited from KVDataAnalyser | |
| KVDataAnalyser () | |
| Default constructor. More... | |
| virtual | ~ KVDataAnalyser () |
| Bool_t | BatchMode () const |
| virtual Bool_t | CheckStatusUpdateInterval (Long64_t nevents) const |
| virtual Bool_t | CheckTaskVariables () |
| void | ChooseNbEventToRead () |
| Ask user to set number of events to read. More... | |
| void | ChooseRunningMode () |
| void | ChooseUserClass () |
| Choose the user's analysis class. More... | |
| void | DeleteBatchStatusFile () const |
| Delete batch status file (and backup - '.bak') for batch job. More... | |
| void | DoStatusUpdate (Long64_t nevents) const |
| Print infos on events treated, disk usage, memory usage. More... | |
| Bool_t | DoUserClassFilesExist () |
| virtual TTree * | GetAnalysedTree () const |
| KVDataAnalysisTask * | GetAnalysisTask () const |
| const Char_t * | GetBatchName () |
| const Char_t * | GetBatchStatusFileName () const |
| Returns full path to file used to store status of running batch jobs. More... | |
| virtual const KVBatchSystem * | GetBatchSystem () |
| const KVString & | GetDataType () const |
| const Char_t * | GetLaunchDirectory () const |
| Long64_t | GetNbEventToRead (void) const |
| KVDataAnalyser * | GetParent () const |
| TString | GetPathToFileInLaunchDirectory (const TString &) const |
| EProofMode | GetProofMode () const |
| Double_t | GetStatusUpdateInterval () const |
| virtual Long64_t | GetTotalEntriesToRead () const |
| const Char_t * | GetUserClass () |
| const KVString & | GetUserClassDec () const |
| const KVString & | GetUserClassImp () const |
| const KVString & | GetUserClassOptions () const |
| const KVString & | GetUserIncludes () const |
| const KVString & | GetUserLibraries () const |
| Bool_t | IsMenus () const |
| Bool_t | IsQuit () const |
| Bool_t | IsSubmit () const |
| Bool_t | IsUserClassValid () const |
| virtual void | postAnalysis () |
| virtual void | postEndAnalysis () |
| virtual void | postEndRun () |
| virtual void | postInitAnalysis () |
| virtual void | postInitRun () |
| virtual void | preAnalysis () |
| virtual void | preEndAnalysis () |
| virtual void | preEndRun () |
| virtual void | preInitAnalysis () |
| virtual void | preInitRun () |
| virtual void | RegisterUserClass (TObject *) |
| virtual void | Run () |
| Check all task variables, then run analyser. More... | |
| virtual void | RunMenus () |
| Run data analyser in menu-driven mode. More... | |
| Bool_t | RunningInLaunchDirectory () |
| virtual void | SetAnalysedTree (TTree *) |
| void | SetAnalysisTask (KVDataAnalysisTask *at) |
| virtual void | SetAuxFileList (TList *) |
| void | SetBatchMode (Bool_t on=kTRUE) |
| void | SetBatchName (const Char_t *batchname) |
| void | SetBatchSystem (KVBatchSystem *bs) |
| void | SetDataType (const Char_t *name) |
| virtual void | SetFileList (TList *) |
| void | SetMenus (Bool_t on=kTRUE) |
| void | SetNbEventToRead (Long64_t nb=0) |
| void | SetParent (KVDataAnalyser *da) |
| void | SetProofMode (EProofMode e) |
| void | SetQuit (Bool_t yes=kTRUE) |
| void | SetStatusUpdateInterval (double t) |
| void | SetSubmit (Bool_t yes=kTRUE) |
| virtual void | SetTriggerConditionsForRun (int) |
| void | SetUserClass (const Char_t *kvs, Bool_t check=kTRUE) |
| void | SetUserClassOptions (const Char_t *o="") |
| void | SetUserIncludes (const Char_t *incDirs=0) |
| void | SetUserLibraries (const Char_t *libs=0) |
| void | UpdateBatchStatusFile (Int_t totev, Int_t evread, TString disk) const |
| Update infos in batch status file. More... | |
| void | UseBaseClassSubmitTask () |
| void | WriteBatchInfo (TTree *) |
| Public Member Functions inherited from TObject | |
| TObject () | |
| TObject (const TObject &object) | |
| virtual | ~TObject () |
| void | AbstractMethod (const char *method) const |
| virtual void | AppendPad (Option_t *option="") |
| virtual void | Browse (TBrowser *b) |
| ULong_t | CheckedHash () |
| virtual const char * | ClassName () const |
| virtual void | Clear (Option_t *="") |
| virtual TObject * | Clone (const char *newname="") const |
| virtual Int_t | Compare (const TObject *obj) const |
| virtual void | Copy (TObject &object) const |
| virtual void | Delete (Option_t *option="") |
| virtual Int_t | DistancetoPrimitive (Int_t px, Int_t py) |
| virtual void | Draw (Option_t *option="") |
| virtual void | DrawClass () const |
| virtual TObject * | DrawClone (Option_t *option="") const |
| virtual void | Dump () const |
| virtual void | Error (const char *method, const char *msgfmt,...) const |
| virtual void | Execute (const char *method, const char *params, Int_t *error=0) |
| virtual void | Execute (TMethod *method, TObjArray *params, Int_t *error=0) |
| virtual void | ExecuteEvent (Int_t event, Int_t px, Int_t py) |
| virtual void | Fatal (const char *method, const char *msgfmt,...) const |
| virtual TObject * | FindObject (const char *name) const |
| virtual TObject * | FindObject (const TObject *obj) const |
| virtual Option_t * | GetDrawOption () const |
| virtual const char * | GetIconName () const |
| virtual const char * | GetName () const |
| virtual char * | GetObjectInfo (Int_t px, Int_t py) const |
| virtual Option_t * | GetOption () const |
| virtual const char * | GetTitle () const |
| virtual UInt_t | GetUniqueID () const |
| virtual Bool_t | HandleTimer (TTimer *timer) |
| virtual ULong_t | Hash () const |
| Bool_t | HasInconsistentHash () const |
| virtual void | Info (const char *method, const char *msgfmt,...) const |
| virtual Bool_t | InheritsFrom (const char *classname) const |
| virtual Bool_t | InheritsFrom (const TClass *cl) const |
| virtual void | Inspect () const |
| void | InvertBit (UInt_t f) |
| virtual Bool_t | IsEqual (const TObject *obj) const |
| virtual Bool_t | IsFolder () const |
| R__ALWAYS_INLINE Bool_t | IsOnHeap () const |
| virtual Bool_t | IsSortable () const |
| R__ALWAYS_INLINE Bool_t | IsZombie () const |
| virtual void | ls (Option_t *option="") const |
| void | MayNotUse (const char *method) const |
| virtual Bool_t | Notify () |
| void | Obsolete (const char *method, const char *asOfVers, const char *removedFromVers) const |
| void | operator delete (void *ptr) |
| void | operator delete[] (void *ptr) |
| void * | operator new (size_t sz) |
| void * | operator new (size_t sz, void *vp) |
| void * | operator new[] (size_t sz) |
| void * | operator new[] (size_t sz, void *vp) |
| TObject & | operator= (const TObject &rhs) |
| virtual void | Paint (Option_t *option="") |
| virtual void | Pop () |
| virtual void | Print (Option_t *option="") const |
| virtual Int_t | Read (const char *name) |
| virtual void | RecursiveRemove (TObject *obj) |
| void | ResetBit (UInt_t f) |
| virtual void | SaveAs (const char *filename="", Option_t *option="") const |
| virtual void | SavePrimitive (std::ostream &out, Option_t *option="") |
| void | SetBit (UInt_t f) |
| void | SetBit (UInt_t f, Bool_t set) |
| virtual void | SetDrawOption (Option_t *option="") |
| virtual void | SetUniqueID (UInt_t uid) |
| virtual void | SysError (const char *method, const char *msgfmt,...) const |
| R__ALWAYS_INLINE Bool_t | TestBit (UInt_t f) const |
| Int_t | TestBits (UInt_t f) const |
| virtual void | UseCurrentStyle () |
| virtual void | Warning (const char *method, const char *msgfmt,...) const |
| virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) |
| virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) const |
Additional Inherited Members | |
| Public Types inherited from KVDataAnalyser | |
| enum | EProofMode { None , Lite , Proof } |
| Public Types inherited from TObject | |
| enum | EDeprecatedStatusBits |
| enum | EStatusBits |
| Static Public Member Functions inherited from KVDataAnalyser | |
| static Bool_t | AbortProcessingLoop () |
| static KVDataAnalyser * | GetAnalyser (const Char_t *plugin) |
| static Bool_t | IsRunningBatchAnalysis () |
| static void | RunAnalyser (const Char_t *plugin="") |
| static void | SetAbortProcessingLoop (Bool_t now=kTRUE) |
| Static Public Member Functions inherited from TObject | |
| static Longptr_t | GetDtorOnly () |
| static Bool_t | GetObjectStat () |
| static void | SetDtorOnly (void *obj) |
| static void | SetObjectStat (Bool_t stat) |
| Public Attributes inherited from TObject | |
| kBitMask | |
| kCanDelete | |
| kCannotPick | |
| kHasUUID | |
| kInconsistent | |
| kInvalidObject | |
| kIsOnHeap | |
| kIsReferenced | |
| kMustCleanup | |
| kNoContextMenu | |
| kNotDeleted | |
| kObjInCanvas | |
| kOverwrite | |
| kSingleKey | |
| kWriteDelete | |
| kZombie | |
| Protected Attributes inherited from KVDataAnalyser | |
| TList * | fWorkDirInit |
| list of files in working directory before task runs More... | |
| Protected Attributes inherited from TObject | |
| kOnlyPrepStep | |
#include <KVINDRAGeneDataAnalyser.h>
Inheritance diagram for KVINDRAGeneDataAnalyser:
Constructor & Destructor Documentation
◆ KVINDRAGeneDataAnalyser()
| KVINDRAGeneDataAnalyser::KVINDRAGeneDataAnalyser | ( | ) |
Default constructor.
Definition at line 25 of file KVINDRAGeneDataAnalyser.cpp.
◆ ~KVINDRAGeneDataAnalyser()
|
virtual |
Destructor.
Definition at line 35 of file KVINDRAGeneDataAnalyser.cpp.
Member Function Documentation
◆ PrintAvailableRuns()
|
protectedvirtual |
Prints list of available runs, sorted according to multiplicity trigger, for selected dataset, data type/analysis task, and system Returns list containing all run numbers
Reimplemented from KVDataSetAnalyser.
Definition at line 95 of file KVINDRAGeneDataAnalyser.cpp.
◆ SubmitTask()
|
virtual |
Run the interactive analysis make the chosen dataset the active dataset ( = gDataSet; note this also opens database and positions gDataBase & gIndraDB).
Reimplemented from KVDataAnalyser.
Definition at line 48 of file KVINDRAGeneDataAnalyser.cpp.
The documentation for this class was generated from the following files:
- kaliveda.doxygen/KVIndra/analysis/KVINDRAGeneDataAnalyser.h
- kaliveda.doxygen/KVIndra/analysis/KVINDRAGeneDataAnalyser.cpp
